GSR: Simulator - CADD Simulator
Attribute | Value |
---|---|
Title | CADD Simulator |
Short Description | generating simulated single nucleotide and indel variants |
Long Description | The script for generating simulated single nucleotide and indel variants as well as the parameter files used to simulate the variants for the above manuscript are available for download here. This software is released under a MIT license (license text available from the ZIP-archive). Please see the README file contained in the ZIP-archive for further information about the software. |
Last Release | 6 years, 11 months ago |
Homepage | https://cadd.gs.washington.edu/simulator |
Citations | Kircher M, Witten DM, Jain P, O'Roak BJ, Cooper GM, Shendure J, A general framework for estimating the relative pathogenicity of human genetic variants., Nat Genet, 03-01-2014 [ Abstract, cited in PMC ] |
GSR Certification | This simulator has not yet been evaluated for GSR Certification. Learn more about or request GSR Certification. |
Author verification | The basic description provided was derived from a website or publications by the GSR team and has not yet been verified by the simulation author. To modify this entry or add more information, propose changes to this simulator. |
Attribute Category | Attribute |
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Target | |
Type of Simulated Data | |
Variations | |
Simulation Method | |
Input | |
Data Type | |
File format | |
Output | |
Data Type | |
Sequencing Reads | |
File Format | |
Sample Type | |
Phenotype | |
Trait Type | |
Determinants | |
Evolutionary Features | |
Demographic | |
Population Size Changes | |
Gene Flow | |
Spatiality | |
Life Cycle | |
Mating System | |
Fecundity | |
Natural Selection | |
Determinant | |
Models | |
Recombination | |
Mutation Models | |
Events Allowed | |
Other | |
Interface | |
Development | |
Tested Platforms | |
Language | |
License | |
GSR Certification |
No example publication using CADD Simulator has been provided.
Please propose new citations if you are aware of publications that use this software.