GSR: Simulator - CADD Simulator

Basic Package Attributes
AttributeValue
Title CADD Simulator
Short Description generating simulated single nucleotide and indel variants
Long Description The script for generating simulated single nucleotide and indel variants as well as the parameter files used to simulate the variants for the above manuscript are available for download here. This software is released under a MIT license (license text available from the ZIP-archive). Please see the README file contained in the ZIP-archive for further information about the software.
Last Release 6 years, 11 months ago
Homepagehttps://cadd.gs.washington.edu/simulator
Citations Kircher M, Witten DM, Jain P, O'Roak BJ, Cooper GM, Shendure J, A general framework for estimating the relative pathogenicity of human genetic variants., Nat Genet, 03-01-2014 [ Abstract, cited in PMC ]
GSR Certification This simulator has not yet been evaluated for GSR Certification. Learn more about or request GSR Certification.
Author verificationThe basic description provided was derived from a website or publications by the GSR team and has not yet been verified by the simulation author. To modify this entry or add more information, propose changes to this simulator.
Detailed Attributes
Attribute CategoryAttribute
Target
Type of Simulated Data
Variations
Simulation Method
Input
Data Type
File format
Output
Data Type
Sequencing Reads
File Format
Sample Type
Phenotype
Trait Type
Determinants
Evolutionary Features
Demographic
Population Size Changes
Gene Flow
Spatiality
Life Cycle
Mating System
Fecundity
Natural Selection
Determinant
Models
Recombination
Mutation Models
Events Allowed
Other
Interface
Development
Tested Platforms
Language
License
GSR Certification

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