GenomePop2 is a specialization of the program GenomePop just to manage SNPs under more flexible and useful settings. If you need models with more than 2 alleles please use the GenomePop program version. Long Description (required)
This new version allows the forward simulation of sequences of biallelic positions. As in the previous version, a number of evolutionary and demographic settings are allowed. Several populations under any migration model can be implemented, contraction-expansion scenarios, directional or divergent selection. Theoretical or simulated initial equilibrium population can be computed the same as speciation processes via the simulation of user-defined population splits. Each population consists of a number N of individuals. Each individual is represented by one or more chromosomes with constant or variable (hotspots) recombination between binary sites. http://acraaj.webs.uvigo.es/GenomePop2.htm
Step 1: Use the attribute tree to add new attributes or remove pre-selected attributes to describe the simulator.
Every sub-attribute is selected Not all sub-attributes are selectedFill Clear Expand Collapse Reset
Summary of Proposed Changes Step 2: Review list of proposed attribute addition(s) and subtraction(s).
Can't Find the Attribute You Are Looking For? If you would like to propose an attribute that you cannot find in the tree above, or if you would like to add a clarification to one or more attributes for this simulator (e.g. a specific file format for attribute /Output/File Format/Other), please list them in the Additional Comment box of the Submit tab .
Summary of Proposed Changes Current Citations/Applications
[Pubmed ID: 18447924 ],
Carvajal-Rodríguez A ,
GENOMEPOP: a program to simulate genomes in populations. ,
BMC Bioinformatics ,
04-30-2008 ,
https://www.ncbi.nlm.nih.gov/pubmed/?term=18447924, Primary Citation