Coalescent simulation of hotspot recombination Long Description (required) SNPsim is a population genetic simulator that generates samples of SNP (Single Nucleotide Polymorphisms) haplotypes and diploid biallelic genotypes. It is based on the coalescent with recombination (Hudson 1983) modified by Wiuf and Posada (2003) to include recombination hotspots. SNPsim also allows for the specification of demographic periods and different mutation models. http://code.google.com/p/phylosoftware/ None Step 1: Use the attribute tree to add new attributes or remove pre-selected attributes to describe the simulator. Every sub-attribute is selected Not all sub-attributes are selected Fill Clear Expand Collapse Reset Summary of Proposed Changes Step 2: Review list of proposed attribute addition(s) and subtraction(s). Can't Find the Attribute You Are Looking For?
If you would like to propose an attribute that you cannot find in the tree above, or if you would like to add a clarification to one or more attributes for this simulator (e.g. a specific file format for attribute /Output/File Format/Other), please list them in the
Additional Comment box of the Submit tab. Summary of Proposed Changes Current Citations/Applications
Simulating haplotype blocks in the human genome. Bioinformatics,
https://www.ncbi.nlm.nih.gov/pubmed/?term=12538254, Primary Citation