GSR: Simulator - cophesim
Attribute | Value |
---|---|
Title | cophesim |
Short Description | A Comprehensive Simulator of Phenotype-Genotype Connections for Testing Methods of Genetic Analysis |
Long Description | Simulation tool to simulate phenotypes: continuous, dichotomous and survival for common variants from existing genotype data simulated with some other tool. |
Version | 1.4.1 |
Last Release | 6 years, 9 months ago |
Homepage | https://sites.duke.edu/barusoftware/othersoft/cophesim/ |
Citations | Zhbannikov IY, Arbeev KG, Yashin AI, cophesim: a comprehensive phenotype simulator for testing novel association methods., F1000Res, 08-01-2017 [ Abstract, cited in PMC ] |
GSR Certification | ✔ Accessibility |
Last evaluated | 07-16-2021 (980 days ago) |
Author verification | The basic description provided was derived from a website or publications by the GSR team and has not yet been verified by the simulation author. To modify this entry or add more information, propose changes to this simulator. |
Attribute Category | Attribute |
---|---|
Target | |
Type of Simulated Data | |
Variations | |
Simulation Method | |
Input | |
Data Type | |
File format | |
Output | |
Data Type | |
Sequencing Reads | |
File Format | |
Sample Type | |
Phenotype | |
Trait Type | |
Determinants | |
Evolutionary Features | |
Demographic | |
Population Size Changes | |
Gene Flow | |
Spatiality | |
Life Cycle | |
Mating System | |
Fecundity | |
Natural Selection | |
Determinant | |
Models | |
Recombination | |
Mutation Models | |
Events Allowed | |
Other | |
Interface | |
Development | |
Tested Platforms | |
Language | |
License | |
GSR Certification | Accessibility, Documentation, |
Number of Primary Citations: 1
Number of Non-Primary Citations: 0
No example publication using cophesim has been provided.
Please propose new citations if you are aware of publications that use this software.