GSR: Simulator - CuReSim
|Short Description||A customized read simulator|
|Long Description||CuReSim (Customized Read Simulator) is a customized tool which generates synthetic New-Generation Sequencing reads, supporting read simulation for major letter-base sequencing platforms. CuReSim is developed in Java and is distributed as an executable jar file. Wrappers to integrate CuReSim in Galaxy are also available.|
|Last Release||5 years, 6 months ago|
|Citations||Caboche S, Audebert C, Lemoine Y, Hot D, Comparison of mapping algorithms used in high-throughput sequencing: application to Ion Torrent data., BMC Genomics, 04-05-2014 [ Abstract, cited in PMC ]|
|Last evaluated||09-06-2018 (854 days ago)|
|Author verification||The basic description provided was derived from a website or publications by the GSR team and has not yet been verified by the simulation author. To modify this entry or add more information, propose changes to this simulator.|
|Type of Simulated Data||Sequencing Reads,|
|Variations||Single Nucleotide Variation, Insertion and Deletion,|
|Sequencing Reads||Illumina, Roche 454, SOLiD, IonTorrent,|
|File Format||Fasta or Fastq,|
|Population Size Changes|
No example publication using CuReSim has been provided.
Please propose new citations if you are aware of publications that use this software.