GSR: Simulator - DHOEM

Basic Package Attributes
AttributeValue
Title DHOEM
Short Description a statistical simulation software for simulating new markers in real SNP marker data
Long Description A simulation tool named DHOEM (densification of haplotypes by loess regression and maximum likelihood) which is free from population assumptions and simulates new markers in real SNP marker data. The main objective of DHOEM is to generate a new population, which incorporates real and simulated SNP by statistical learning from an initial population, which match the realized features of the latter.
Project Started 2015
Last Release 4 years, 2 months ago
Homepagehttp://dhoem.sourceforge.net/
Citations Jacquin L, Cao TV, Grenier C, Ahmadi N, DHOEM: a statistical simulation software for simulating new markers in real SNP marker data., BMC Bioinformatics, 12-03-2015 [ Abstract, cited in PMC ]
GSR Certification This package has been evaluated. No certificates were awarded at this time.
Last evaluated07-11-2019 (464 days ago)
Author verificationThe basic description provided was derived from a website or publications by the GSR team and has not yet been verified by the simulation author. To modify this entry or add more information, propose changes to this simulator.
Detailed Attributes
Attribute CategoryAttribute
Target
Type of Simulated DataGenotype at Genetic Markers,
VariationsBiallelic Marker,
Simulation MethodResample Existing Data, Other,
Input
Data Type
File format
Output
Data Type
Sequencing Reads
File Format
Sample Type
Phenotype
Trait Type
Determinants
Evolutionary Features
Demographic
Population Size Changes
Gene Flow
Spatiality
Life Cycle
Mating System
Fecundity
Natural Selection
Determinant
Models
Recombination
Mutation Models
Events Allowed
Other
InterfaceCommand-line,
Development
Tested PlatformsWindows,
LanguageR,
License
GSR Certification

No example publication using DHOEM has been provided.

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