GSR: Simulator - discoal

Basic Package Attributes
AttributeValue
Title discoal
Short Description flexible coalescent simulations with selection
Long Description discoal is a coalescent simulation program capable of simulating models with recombination, selective sweeps, and demographic changes including population splits and admixture events.
Project Started 2017
Last Release 1 year, 2 months ago
Homepagehttps://github.com/kr-colab/discoal
Citations Kern AD, Schrider DR, Discoal: flexible coalescent simulations with selection., Bioinformatics, 12-15-2016 [ Abstract, cited in PMC ]
GSR Certification

Accessibility
Documentation
Application
Support

Last evaluated07-08-2021 (73 days ago)
Author verificationThe basic description provided was derived from a website or publications by the GSR team and has not yet been verified by the simulation author. To modify this entry or add more information, propose changes to this simulator.
Detailed Attributes
Attribute CategoryAttribute
Target
Type of Simulated DataHaploid DNA Sequence,
VariationsSingle Nucleotide Variation,
Simulation MethodStandard Coalescent,
Input
Data Type
File format
Output
Data Type
Sequencing Reads
File Format
Sample Type
Phenotype
Trait Type
Determinants
Evolutionary Features
Demographic
Population Size ChangesConstant Size, Exponential Growth or Decline, Logistic Growth, Bottleneck, Carrying Capacity, User Defined,
Gene Flow
Spatiality
Life Cycle
Mating System
Fecundity
Natural Selection
DeterminantSingle-locus,
Models
RecombinationUniform, Varying Recombination Rates, Gene Conversion Allowed,
Mutation Models
Events Allowed
Other
Interface
Development
Tested Platforms
LanguageC or C++,
LicenseGNU Public License,
GSR CertificationAccessibility, Documentation, Support,

No example publication using discoal has been provided.

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