GSR: Simulator - DWGSIM

Basic Package Attributes
AttributeValue
Title DWGSIM
Short Description Whole Genome Simulator for Next-Generation Sequencing
Long Description Whole genome simulation can be performed with dwgsim. dwgsim is based off of wgsim found in SAMtools written by Heng Li, and forked from DNAA. It was modified to handle ABI SOLiD and Ion Torrent data, as well as various assumptions about aligners and positions of indels. Many new features have been subsequently added.
Version 0.1.12
Project Started 2011
Last Release 3 years, 4 months ago
Homepagehttps://github.com/nh13/DWGSIM
Citations
GSR Certification

Accessibility
Documentation
Application
Support

Last evaluated06-14-2018 (855 days ago)
Author verificationThe basic description provided was derived from a website or publications by the GSR team and has not yet been verified by the simulation author. To modify this entry or add more information, propose changes to this simulator.
Detailed Attributes
Attribute CategoryAttribute
Target
Type of Simulated Data
VariationsSingle Nucleotide Variation, Insertion and Deletion,
Simulation MethodOther,
Input
Data Type
File format
Output
Data Type
Sequencing ReadsIllumina, SOLiD, IonTorrent,
File FormatFasta or Fastq,
Sample Type
Phenotype
Trait Type
Determinants
Evolutionary Features
Demographic
Population Size Changes
Gene Flow
Spatiality
Life Cycle
Mating System
Fecundity
Natural Selection
Determinant
Models
Recombination
Mutation Models
Events Allowed
Other
InterfaceCommand-line,
Development
Tested Platforms
LanguageC or C++,
LicenseGNU Public License,
GSR CertificationAccessibility, Documentation, Support,

No example publication using DWGSIM has been provided.

Please propose new citations if you are aware of publications that use this software.


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