Generating samples for association studies based on HapMap data Long Description (required)
A new version of gs is available. In addition to the functionalities implemented earlier, gs2.0 has implemented a comprehensive yet flexible model to simulate genetic and environmental interactions. The program can be used to generate samples in testing algorithms for tag SNP selection, haplotype inference, as well as epistatic detection. http://engr.case.edu/li_jing/gs.html
Step 1: Use the attribute tree to add new attributes or remove pre-selected attributes to describe the simulator.
Every sub-attribute is selected Not all sub-attributes are selectedFill Clear Expand Collapse Reset
Summary of Proposed Changes Step 2: Review list of proposed attribute addition(s) and subtraction(s).
Can't Find the Attribute You Are Looking For? If you would like to propose an attribute that you cannot find in the tree above, or if you would like to add a clarification to one or more attributes for this simulator (e.g. a specific file format for attribute /Output/File Format/Other), please list them in the Additional Comment box of the Submit tab .
Summary of Proposed Changes Current Citations/Applications
[Pubmed ID: 18218094 ],
Li J, Chen Y ,
Generating samples for association studies based on HapMap data. ,
BMC Bioinformatics ,
01-24-2008 ,
https://www.ncbi.nlm.nih.gov/pubmed/?term=18218094, Primary Citation
[Pubmed ID: 34977040 ],
Guo Y, Wu C, Yuan Z, Wang Y, Liang Z, Wang Y, Zhang Y, Xu L ,
Gene-Based Testing of Interactions Using XGBoost in Genome-Wide Association Studies. ,
Front Cell Dev Biol ,
12-16-2021 ,
https://www.ncbi.nlm.nih.gov/pubmed/?term=34977040, , Application