GSR: Simulator - MIDASim

Basic Package Attributes
Attribute	Value
Title	MIDASim
Short Description	R package for simulating realistic microbiome data from a user-provided template.
Long Description	MIDASim generates realistic microbiome datasets by adapting a template dataset, preserving distributional and correlation structure, and allowing controlled signals such as taxon abundance shifts, prevalence changes, and library-size changes.
Keywords	microbiome; microbiome data simulation; taxon correlation; Gaussian copula; R package
Version	2.0
Homepage	https://cran.r-project.org/package=MIDASim
Citations
GSR Certification	This simulator has not yet been evaluated for GSR Certification. Learn more about or request GSR Certification.
Author verification	The basic description provided was derived from a website or publications by the GSR team and has not yet been verified by the simulation author. To modify this entry or add more information, propose changes to this simulator.

Detailed Attributes
Attribute Category	Attribute
Target
Type of Simulated Data	Sequencing Reads,
Variations
Simulation Method
Input
Data Type	Empirical,
File format
Output
Data Type
Sequencing Reads
File Format
Sample Type
Phenotype
Trait Type
Determinants
Evolutionary Features
Demographic
Population Size Changes
Gene Flow
Spatiality
Life Cycle
Mating System
Fecundity
Natural Selection
Determinant
Models
Recombination
Mutation Models
Events Allowed
Other
Interface	Command-line, Script-based,
Development
Tested Platforms	Linux and Unix,
Language	R,
License	GNU Public License,
GSR Certification

Number of Primary Citations: 0

Number of Non-Primary Citations: 0

No example publication using MIDASim has been provided.

Please propose new citations if you are aware of publications that use this software.

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