GSR: Simulator - PARA-suite
|Short Description||PAR-CLIP specific sequence read simulation and processing|
|Long Description||PAR-CLIP Analyzing suite. Useful tools for short and error prone sequence read handling. Note, that the PARA-suite addon of the Burrows-Wheeler Aligner (BWA) is necessary for the mapping tool of the PARA-suite.|
|Last Release||4 years, 7 months ago|
|Citations||Kloetgen A, Borkhardt A, Hoell JI, McHardy AC, The PARA-suite: PAR-CLIP specific sequence read simulation and processing., PeerJ, 10-27-2016 [ Abstract, cited in PMC ]|
|GSR Certification||This simulator has not yet been evaluated for GSR Certification. Learn more about or request GSR Certification.|
|Author verification||The basic description provided was derived from a website or publications by the GSR team and has not yet been verified by the simulation author. To modify this entry or add more information, propose changes to this simulator.|
|Type of Simulated Data||Haploid DNA Sequence,|
|Variations||Single Nucleotide Variation,|
|Simulation Method||Resample Existing Data,|
|Data Type||Genotype or Sequence,|
|File Format||SAM or BAM,|
|Population Size Changes|
|License||GNU Public License,|
No example publication using PARA-suite has been provided.
Please propose new citations if you are aware of publications that use this software.