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GSR: Simulator - pWGBSSimla
| Attribute | Value |
|---|---|
| Title | pWGBSSimla |
| Short Description | a profile-based whole-genome bisulphite sequencing data simulator |
| Long Description | a profile-based whole-genome bisulphite sequencing data simulator |
| Keywords | bisulphite sequencing |
| Version | 0.1.0 |
| Project Started | 2019 |
| Homepage | https://omicssimla.sourceforge.io/index.html |
| Citations | Chung RH, Kang CY, pWGBSSimla: a profile-based whole-genome bisulfite sequencing data simulator incorporating methylation QTLs, allele-specific methylations and differentially methylated regions., Bioinformatics, 02-01-2020 [ Abstract, cited in PMC ] |
| GSR Certification | Accessibility |
| Last evaluated | 09-30-2021 (926 days ago) |
| Author verification | The basic description provided was derived from a website or publications by the GSR team and has not yet been verified by the simulation author. To modify this entry or add more information, propose changes to this simulator. |
| Attribute Category | Attribute |
|---|---|
| Target | |
| Type of Simulated Data | Haploid DNA Sequence, |
| Variations | Other, |
| Simulation Method | |
| Input | |
| Data Type | |
| File format | |
| Output | |
| Data Type | |
| Sequencing Reads | |
| File Format | |
| Sample Type | |
| Phenotype | |
| Trait Type | |
| Determinants | |
| Evolutionary Features | |
| Demographic | |
| Population Size Changes | |
| Gene Flow | |
| Spatiality | |
| Life Cycle | |
| Mating System | |
| Fecundity | |
| Natural Selection | |
| Determinant | |
| Models | |
| Recombination | |
| Mutation Models | |
| Events Allowed | |
| Other | |
| Interface | |
| Development | |
| Tested Platforms | |
| Language | C or C++, R, |
| License | |
| GSR Certification | Documentation, |
Number of Primary Citations: 1
Number of Non-Primary Citations: 0
No example publication using pWGBSSimla has been provided.
Please propose new citations if you are aware of publications that use this software.