GSR: Simulator - scMultiSim

Basic Package Attributes
Attribute	Value
Title	scMultiSim
Short Description	Simulator for single-cell multi-omics and spatial omics data.
Long Description	scMultiSim generates multimodal single-cell data, including gene expression, chromatin accessibility, RNA velocity, and spatial coordinates, guided by gene regulatory networks and cell-cell interactions for benchmarking multi-omics methods.
Keywords	single-cell multi-omics; spatial omics; gene regulatory networks; cell-cell interactions; RNA velocity; R
Version	1.1.10
Homepage	https://zhanglabgt.github.io/scMultiSim/
Citations
GSR Certification	This simulator has not yet been evaluated for GSR Certification. Learn more about or request GSR Certification.
Author verification	The basic description provided was derived from a website or publications by the GSR team and has not yet been verified by the simulation author. To modify this entry or add more information, propose changes to this simulator.

Detailed Attributes
Attribute Category	Attribute
Target
Type of Simulated Data
Variations
Simulation Method
Input
Data Type
File format
Output
Data Type
Sequencing Reads
File Format
Sample Type
Phenotype
Trait Type
Determinants
Evolutionary Features
Demographic
Population Size Changes
Gene Flow
Spatiality
Life Cycle
Mating System
Fecundity
Natural Selection
Determinant
Models
Recombination
Mutation Models
Events Allowed
Other
Interface	Command-line, Script-based,
Development
Tested Platforms	Linux and Unix,
Language
License
GSR Certification

Number of Primary Citations: 0

Number of Non-Primary Citations: 0

No example publication using scMultiSim has been provided.

Please propose new citations if you are aware of publications that use this software.

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