GSR: Simulator - Xsim

AttributeValue
Title Xsim
Short Description Julia package for simulating sequence data, pedigrees, and modern breeding programs.
Long Description XSim/XSimV2 simulates founder genomes, phenomes, complex pedigrees, mating schemes, selection, and successive generations for animal and plant breeding programs. It supports real sequence founders and multiple genetic-evaluation models.
Keywords Julia; breeding program simulation; pedigree; genomic selection; sequence data; quantitative genetics; animal breeding; plant breeding
Homepagehttps://reworkhow.github.io/XSim.jl/
Citations
GSR Certification This simulator has not yet been evaluated for GSR Certification. Learn more about or request GSR Certification.
Author verificationThe basic description provided was derived from a website or publications by the GSR team and has not yet been verified by the simulation author. To modify this entry or add more information, propose changes to this simulator.
Attribute CategoryAttribute
Target
Type of Simulated DataGenotype at Genetic Markers, Haploid DNA Sequence,
Variations
Simulation MethodForward-time,
Input
Data Type
File format
Output
Data TypeGenotype or Sequence,
Sequencing Reads
File Format
Sample Type
Phenotype
Trait Type
DeterminantsMultiple Genetic Markers,
Evolutionary Features
Demographic
Population Size Changes
Gene Flow
Spatiality
Life Cycle
Mating System
Fecundity
Natural Selection
Determinant
Models
Recombination
Mutation Models
Events Allowed
Other
InterfaceCommand-line, Script-based,
Development
Tested PlatformsLinux and Unix,
LanguageOther,
License
GSR Certification

Number of Primary Citations: 0

Number of Non-Primary Citations: 0

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